Index

H

hugenomic (C++ type) hugenomic::gpu (C++ type) hugenomic::gpu::ksw2 (C++ class) hugenomic::gpu::ksw2::align_batch (C++ function) hugenomic::gpu::ksw2::align_batch_indirect_storage (C++ function) hugenomic::gpu::ksw2::cigar_op (C++ type) hugenomic::gpu::ksw2::get_cigar_op_length (C++ function) hugenomic::gpu::ksw2::get_cigar_op_type (C++ function) hugenomic::gpu::ksw2::ksw2 (C++ function) hugenomic::gpu::ksw2::MAX_NOT_FOUND (C++ member) hugenomic::gpu::ksw2::MAX_SCORING_MATRIX_SIZE (C++ member) hugenomic::gpu::ksw2::pimpl (C++ member)

hugenomic::gpu::ksw2::response (C++ struct) hugenomic::gpu::ksw2::response::cigar (C++ member) hugenomic::gpu::ksw2::response::extension_max_score (C++ member) hugenomic::gpu::ksw2::response::extension_query_end_position (C++ member) hugenomic::gpu::ksw2::response::extension_target_end_position (C++ member) hugenomic::gpu::ksw2::response::global_max_score (C++ member) hugenomic::gpu::ksw2::response::global_query_cigar (C++ member) hugenomic::gpu::ksw2::response::global_query_max_score (C++ member) hugenomic::gpu::ksw2::response::global_query_target_end_position (C++ member) hugenomic::gpu::ksw2::response::global_target_max_score (C++ member) hugenomic::gpu::ksw2::response::global_target_query_end_position (C++ member) hugenomic::gpu::ksw2::response::zdropped (C++ member) hugenomic::gpu::ksw2::~ksw2 (C++ function)